Literature summary extracted from
Friemann, R.; Lee, K.; Brown, E.N.; Gibson, D.T.; Eklund, H.; Ramaswamy, S.
Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system (2009), Acta Crystallogr. Sect. D, 65, 24-33.
Cloned(Commentary)
EC Number |
Cloned (Comment) |
Organism |
---|
1.14.12.11 |
co-overexpression of TDO-F, TDO-R, TDO-O and apo-TDO-O in Escherichia coli |
Pseudomonas putida |
Crystallization (Commentary)
EC Number |
Crystallization (Comment) |
Organism |
---|
1.14.12.11 |
purified recombinant enzyme system components, hanging-drop or sitting-drop vapour diffusion method, from 1.4 M ammonium sulfate, 0.1 M HEPES, pH 7.7. TDO-F crystallized in 38% PEG 8000, 0.1 M MES pH 6.1 or 37% PEG 8000, 0.1 M MES, pH 5.8. Apo-TDO-O crystallizes in 40% w/v PEG 600, 0.1 M sodium citrate, pH 5.8. Cocrystallization experiments with Fe(NH4)2(SO4)2 and toluene were performed under strict anaerobic conditions in 40% w/v PEG 600, 0.1 M sodium citrate pH 6.1, 20-50 mM Fe(NH4)2(SO4)2 and 20 mM toluene, X-ray diffraction structure determinhation and analysis at 1.2-3.2 A resolution, molecular replacement, structure modelling, overview |
Pseudomonas putida |
Metals/Ions
EC Number |
Metals/Ions |
Comment |
Organism |
Structure |
---|
1.14.12.11 |
Iron |
the catalytic subunit contains a Rieske [2Fe2S] cluster and mononuclear iron at the active site. The iron is not strongly bound and is easily removed during enzyme purification |
Pseudomonas putida |
|
Natural Substrates/ Products (Substrates)
EC Number |
Natural Substrates |
Organism |
Comment (Nat. Sub.) |
Natural Products |
Comment (Nat. Pro.) |
Rev. |
Reac. |
---|
1.14.12.11 |
additional information |
Pseudomonas putida |
the enzyme is organized in a multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system. The TDO system is composed of a reductase, TDO-R, a Rieske [2Fe2S] ferredoxin, TDO-F, and a terminal dioxygenase, TDO-O, overview. TDO-F shuttles electrons from NADH via a flavin in TDO-R to TDO-O, which catalyzes the enantioselective addition of dioxygen to the aromatic nucleus to form cis-(1R,2S)-dihydroxy-3-methylcyclohexa-3,5-diene |
? |
- |
? |
|
Organism
EC Number |
Organism |
UniProt |
Comment |
Textmining |
---|
1.14.12.11 |
Pseudomonas putida |
- |
- |
- |
Purification (Commentary)
EC Number |
Purification (Comment) |
Organism |
---|
1.14.12.11 |
recombinant TDO-F, TDO-R, TDO-O and apo-TDO-O from Escherichia coli |
Pseudomonas putida |
Reaction
EC Number |
Reaction |
Comment |
Organism |
Reaction ID |
---|
1.14.12.11 |
toluene + NADH + H+ + O2 = (1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diol + NAD+ |
reaction mechanism, structure-function reklationship of the enzyme organized in a multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system, overview |
Pseudomonas putida |
|
Substrates and Products (Substrate)
EC Number |
Substrates |
Comment Substrates |
Organism |
Products |
Comment (Products) |
Rev. |
Reac. |
---|
1.14.12.11 |
additional information |
the enzyme is organized in a multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system. The TDO system is composed of a reductase, TDO-R, a Rieske [2Fe2S] ferredoxin, TDO-F, and a terminal dioxygenase, TDO-O, overview. TDO-F shuttles electrons from NADH via a flavin in TDO-R to TDO-O, which catalyzes the enantioselective addition of dioxygen to the aromatic nucleus to form cis-(1R,2S)-dihydroxy-3-methylcyclohexa-3,5-diene |
Pseudomonas putida |
? |
- |
? |
|
1.14.12.11 |
additional information |
enzyme active site structure, the orientation of the toluene substrate in the active site is consistent with the regiospecificity of oxygen incorporation seen in the product formed, overview |
Pseudomonas putida |
? |
- |
? |
|
Subunits
EC Number |
Subunits |
Comment |
Organism |
---|
1.14.12.11 |
hexamer |
enzyme is a heterohexamer containing a catalytic and a structural subunit type, consists of three domains: an FAD-binding domain, an NADH-binding domain and a C-terminal domain |
Pseudomonas putida |
1.14.12.11 |
More |
the enzyme is organized in a multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system, overview |
Pseudomonas putida |
Synonyms
EC Number |
Synonyms |
Comment |
Organism |
---|
1.14.12.11 |
TDO |
- |
Pseudomonas putida |
1.14.12.11 |
toluene 2,3-dioxygenase |
- |
Pseudomonas putida |